Next-Generation Sequencing Data Analysis Program

Decoding Life: Master the Art of NGS Data Analysis

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MODE
Online/ e-LMS

TYPE
Self Paced

LEVEL
Moderate

DURATION
1 Month

About

The Next-Generation Sequencing Data Analysis program offers a deep dive into the techniques and technologies used in modern genomics. Over one month, participants will learn about various sequencing platforms, including Illumina, PacBio, and Oxford Nanopore, and how to utilize popular bioinformatics tools and software for data analysis. The course will cover essential topics such as sequencing data quality control, genome assembly, variant calling, and functional annotation.

Aim

This program is designed to equip participants with the skills to analyze next-generation sequencing (NGS) data, crucial for advancements in genomics, personalized medicine, and biological research. Through hands-on training and theoretical knowledge, students will learn to manage, analyze, and interpret large datasets to drive discoveries and innovations in the life sciences.

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Program Objectives

Master the use of bioinformatics tools for NGS data analysis.
Understand the principles of sequencing technologies and their applications.
Perform quality control, read alignment, and variant analysis.
Develop skills in interpreting and reporting genomic data.
Prepare for advanced research or professional roles in genomics and biotechnology.

Program Structure

Module 1-

Introduction to NGS Technology
Overview of NGS data formats
Accessing NGS data using SRA tool kit
Quality control (FastQC) of reads

Module 2-

Processing of raw reads, adapter clipping, quality trimming
Read mapping (BWA, BWA-MEM, Bowtie2) to reference sequence
Mapping output (SAM/BAM format)
Visualization and evaluation of mapping quality
Variant Call File Format (VCF)

Module 3-

Bacterial whole genome assembly using SPADES
Assessment of genome assembly using BUSCO, QUAST
Genome Annotation
Functional annotation using EGG-NOG mapper

Participant’s Eligibility

Undergraduate degree in Genetics, Bioinformatics, Biology, or related fields.
Professionals in biomedical, agricultural, or environmental sectors.
Individuals with a foundational understanding of molecular biology and an interest in genomics.

Program Outcomes

Comprehensive understanding of NGS technologies and data analysis.
Ability to perform independent genomic analysis using advanced tools.
Skills in managing and interpreting large genomic datasets.
Preparedness for roles in research, clinical settings, or the biotech industry.
Enhanced problem-solving and analytical skills in a genomic context.

Fee Structure

Standard Fee: INR ~~4,998~~ USD ~~110~~

Discounted Fee: INR 2499 USD 55

We are excited to announce that we now accept payments in over 20 global currencies, in addition to USD. Check out our list to see if your preferred currency is supported. Enjoy the convenience and flexibility of paying in your local currency!

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Certificate

Program Assessment

Certification to this program will be based on the evaluation of following assignment (s)/ examinations:

Exam	Weightage
Mid Term Assignments	50 %
Project Report Submission (Includes Mandatory Paper Publication)	50 %

To study the printed/online course material, submit and clear, the mid term assignments, project work/research study (in completion of project work/research study, a final report must be submitted) and the online examination, you are allotted a 1-month period. You will be awarded a certificate, only after successful completion/ and clearance of all the aforesaid assignment(s) and examinations.