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Biotechnology · Moderate · Live online

AI-Powered Protein Engineering: From Molecular Discovery to Therapeutic Innovation

From Protein Sequences to Therapeutic Candidates — Harness AI, Generative Design and Structural Bioinformatics to Engineer Next-Generation Proteins.

16–18 Nov 20265:30 PM IST3 Days(60-90 min each day)Certificate

About This Course

This 3-day mentor-led workshop introduces AI-powered approaches for modern protein engineering and therapeutic protein discovery. Participants will explore protein sequence analysis, structure prediction, functional-site identification, generative protein design, sequence optimisation, antibody and peptide engineering, molecular interaction analysis, and computational validation. The workshop follows a practical research workflow from protein sequence and structure to AI-assisted design, candidate evaluation, and therapeutic prioritisation.

Aim

To provide practical, research-oriented training in AI-assisted protein engineering, combining structural bioinformatics, deep learning, generative AI, protein design, and computational validation for therapeutic and industrial protein development.

Workshop Objectives

  • Understand the principles of computational and AI-driven protein engineering.
  • Analyse protein sequences, evolutionary conservation, and structure–function relationships.
  • Apply AI-based approaches for protein structure prediction.
  • Identify functional sites, binding pockets, and potential engineering regions.
  • Understand protein language models and AI-based sequence representations.
  • Explore generative AI for de novo protein and scaffold design.
  • Perform protein mutation analysis and computational sequence optimisation.
  • Explore AI-assisted antibody and therapeutic peptide engineering.
  • Evaluate protein stability, solubility, specificity, and binding properties.
  • Analyse protein–protein and protein–ligand interactions.
  • Understand molecular docking and molecular-dynamics-based validation.
  • Explore AI-driven enzyme engineering for biomedical and industrial applications.
Next: Day-by-day →

Workshop Structure

📅 Day 1: AI for Protein Structure, Function & Molecular Discovery

Focus: Analyse protein sequences and structures to identify functional and engineering opportunities.

  • Protein engineering and computational protein-design fundamentals
  • AI and deep learning in structural biology
  • Protein sequence analysis and evolutionary conservation
  • Structure–function relationships
  • AI-based protein structure prediction
  • Structural visualisation and analysis
  • Functional-site and binding-pocket identification
  • Engineering-target selection
  • Disease-associated proteins and enzyme-engineering case studies

🛠️ Hands-on

Analyse a target protein sequence, predict/explore its structure, visualise structural features, and identify potential engineering sites.

Tools: AlphaFold, ColabFold, BLAST, Clustal Omega, PyMOL, ChimeraX, Python, Google Colab


📅 Day 2: Generative AI & Next-Generation Protein Design

Focus: Use AI and generative approaches to create and optimise novel protein sequences and therapeutic candidates.

  • Protein language models and sequence representations
  • Generative AI for de novo protein design
  • Novel protein scaffolds and sequence generation
  • Mutation analysis and rational sequence redesign
  • Structure-conditioned protein design
  • Computational sequence optimisation
  • AI-assisted antibody and therapeutic peptide engineering
  • Prediction of stability, solubility, specificity, and binding affinity
  • Candidate sequence evaluation and prioritisation

🛠️ Hands-on

Generate or redesign candidate protein sequences, compare variants, evaluate predicted properties, and prioritise promising candidates.

Tools: ProteinMPNN, RFdiffusion, DiffAb, AntiFold, Immune Builder, SAbPred, Python, Google Colab


📅 Day 3: Therapeutic Protein Engineering & Translational Validation

Focus: Evaluate engineered proteins for molecular interactions, therapeutic potential, and translational feasibility.

  • AI-guided therapeutic protein and antibody development
  • Protein–protein and protein–ligand interaction analysis
  • Molecular docking and computational validation
  • Molecular-dynamics concepts for structural assessment
  • AI-driven enzyme engineering for biomedical and industrial applications
  • Therapeutic proteins for cancer, infectious diseases, and rare disorders
  • Stability, specificity, solubility, and developability assessment
  • Immunogenicity and biomanufacturing considerations
  • Candidate ranking and computational validation
  • Translational applications and experimental validation strategies

🛠️ Hands-on

Evaluate engineered candidates using structural and interaction evidence and develop an integrated computational protein-engineering workflow for candidate prioritisation.

Tools: AlphaFold, ColabFold, PyMOL, ChimeraX, ProteinMPNN, RFdiffusion, Python, Google Colab

Who Should Enrol?

  • Graduate & Postgraduate Students – Biotechnology, Bioinformatics, Biochemistry, Molecular Biology, Chemistry, Pharmacy, Life Sciences, and related fields.
  • PhD Scholars & Researchers – Protein engineering, structural biology, computational biology, drug discovery, antibody engineering, enzyme engineering, and therapeutic proteins.
  • Academicians & Faculty – Professionals interested in AI-driven protein design, structural bioinformatics, and computational biotechnology.
  • Biotechnology Professionals – Protein design, biologics, enzyme engineering, and biotechnology R&D.
  • Pharmaceutical Professionals – Drug discovery, therapeutic proteins, antibody development, and biologics R&D.
  • Bioinformatics & Computational Researchers – AI/ML, structural bioinformatics, molecular modelling, and computational protein design.
  • R&D Professionals – Industrial enzyme development, protein optimisation, and next-generation biologics.
Next: Dates →

Important Dates

Registration Ends

November 16, 2026
IST 4:30 PM

Workshop Dates

November 16, 2026 – November 18, 2026
IST 5:30 PM

Workshop Outcomes

  • Analyse protein sequences and evolutionary conservation.
  • Predict and interpret protein structures using AI-based tools.
  • Identify functional sites and potential engineering targets.
  • Apply generative AI concepts to protein sequence design.
  • Generate and evaluate protein variants.
  • Explore computational antibody and peptide engineering.
  • Assess protein stability, solubility, specificity, and binding properties.
  • Analyse protein–protein and protein–ligand interactions.
  • Understand docking and molecular-dynamics-based validation.
  • Apply computational approaches to enzyme engineering.
  • Evaluate therapeutic protein developability and immunogenicity considerations.
  • Prioritise engineered protein candidates for experimental validation.
  • Build an end-to-end computational protein-engineering workflow.
Next: Fees →

Fee Structure

Student Fee

₹2,299 | $60

Enrol as Student

Ph.D. Scholar / Researcher Fee

₹3,499 | $75

Enrol as Ph.D. Scholar / Researcher

Academician / Faculty Fee

₹4,599 | $95

Enrol as Academician / Faculty

Industry Professional Fee

₹5,699 | $120

Enrol as Industry Professional

Next: FAQ →

Frequently asked questions

Will I get the recording?

Yes. Paid participants get the session recordings and study material in their NanoSchool dashboard (My registrations → Recorded Lectures / Study Material).

What if I miss a live session?

Watch the recording in your dashboard and send your questions to the mentor through the support desk.

Do I get a certificate?

Yes, an e-certificate of participation after the workshop, with a QR code anyone can verify and an "Add to LinkedIn" button.

Which fee category applies to me?

Choose the category that matches your current role: Student, Ph.D. Scholar / Researcher, Academician / Faculty or Industry Professional.

How can I pay?

By card, UPI or PayPal on the payment page; international bank transfer is also available there.

What is the refund policy?

See our Returns, Refunds & Cancellation policy: Returns, Refunds & Cancellation policy

Need Help?

We’re here for you!


(+91) 120-4781-217
WhatsApp +91 99581 61117

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