Mentor Based

R for Mathematical Modelling and Analysis of Infectious Disease

Mastering R for Effective Mathematical Modeling and Analysis of Infectious Diseases

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Early access to the e-LMS platform is included

  • Mode: Online/ e-LMS
  • Type: Mentor Based
  • Level: Moderate
  • Duration: 3 weeks

About This Course

This workshop focuses on utilizing R programming for mathematical modeling and analysis of infectious diseases. Participants will gain practical skills in applying R to model disease spread, analyze epidemiological data, and understand the dynamics of infectious disease outbreaks. With hands-on sessions, attendees will learn how to create simulations, interpret results, and explore real-world case studies, making this workshop ideal for researchers, public health professionals, and anyone interested in using data-driven approaches to combat infectious diseases.

Aim

This workshop teaches R programming for mathematical modeling and analysis of infectious diseases. Participants will gain hands-on experience in simulating disease spread and analyzing epidemiological data. Ideal for researchers and public health professionals aiming to apply data-driven approaches in infectious disease management.

Program Objectives

  • Introduction to R Programming for Epidemiology
    Learn the basics of R programming and its application in infectious disease modeling.
  • Mathematical Modeling Techniques
    Understand key mathematical models used to describe the spread of infectious diseases, including SIR and SEIR models.
  • Data Analysis and Interpretation
    Analyze real-world epidemiological data using R, and interpret the results for better decision-making.
  • Simulation of Disease Spread
    Gain hands-on experience in simulating disease transmission and testing different intervention strategies.
  • Model Validation and Calibration
    Learn how to validate and calibrate models to ensure accuracy and reliability in predicting disease outcomes.
  • Application to Public Health
    Apply the acquired knowledge to assess the impact of diseases and develop informed public health strategies.

Program Structure

Week 1: Introduction to Infectious Disease Modeling

  • Module 1: Overview of infectious disease models, epidemiology terms, and core dynamics.
  • Module 2: SIR model fundamentals, key parameters, and hands-on simulation in R.

Week 2: Extending Models and Implementing in R

  • Module 3: SEIR model and extensions like asymptomatic infections and time-varying transmission.
  • Module 4: Implementing ODE models in R, solving differential equations, and debugging.
  • Module 5: Estimating parameters, interpreting R₀/Rt, and model calibration basics.

Week 3: Intervention Strategies and Final Project

  • Module 6: Intervention modeling: vaccination, isolation, and non-pharmaceutical strategies.
  • Module 7: Data complexities, sensitivity analysis, and model limitations.
  • Module 8: Visualization, reporting, and reproducible workflows in R.

Final Project

  • Build and calibrate an outbreak model, run intervention scenarios, and submit a report.

Who Should Enrol?

  • Doctoral Scholars & Researchers: PhD candidates seeking to integrate computational workflows into their molecular research.
  • Postdoctoral Fellows: Early-career scientists aiming to enhance their data-driven publication profile.
  • University Faculty: Professors and HODs interested in modern bioinformatics pedagogy and tool mastery.
  • Industry Scientists: R&D professionals from the Biotechnology and Pharmaceutical sectors transitioning to genomic-driven discovery.
  • Postgraduate Students: Final-year PG students looking for specialized research-grade exposure beyond standard curricula.

Program Outcomes

  • Proficiency in R Programming: Participants will become proficient in using R for modeling and analyzing infectious diseases.
  • Ability to Apply Mathematical Models: Attendees will gain the ability to apply mathematical models like SIR and SEIR to real-world epidemiological scenarios.
  • Enhanced Data Interpretation Skills: Participants will develop strong skills in analyzing and interpreting epidemiological data for effective decision-making.
  • Practical Experience in Disease Simulation: Participants will acquire hands-on experience in simulating the spread of infectious diseases and evaluating various intervention strategies.
  • Improved Understanding of Model Calibration: Attendees will understand how to validate, calibrate, and improve the accuracy of disease models.
  • Contribution to Public Health Solutions: Participants will be equipped to use data-driven modeling to contribute to public health decision-making and strategy formulation.

Fee Structure

Standard: ₹4,998 | $110

Discounted: ₹2499 | $55

We accept 20+ global currencies. View list →

What You’ll Gain

  • Full access to e-LMS
  • Real-world dry lab projects
  • One-on-one project guidance
  • Publication opportunity
  • Self-assessment & final exam
  • e-Certificate & e-Marksheet

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